Docker Image

• The current docker image is cgap/qc:v2

The image contains (but is not limited to) the following software packages:

• granite (0.1.0)
• samtools (1.9)
• gatk4 (4.1.2.0)
• picard (2.20.2)
• bamqc.py
• pigz (2.4)
• pbgzip (2b09f97)
• parallel